* 10 Mycoplasma + 1 Ureaplasma: All vs. All [#e710faf7]
* 10 Mycoplasma + 1 Ureaplasma: All vs. All [#v263eb03]

Download and unpack the Genome archive and at least one anchor
archive. Put both of seqs/ folder (genome sequences) and outputs/
folder (anchors) in same folder. Open any ".anchors" file with GMV to
see the anchors.

"X" and "YY" in filename "mpX-YY-*.anchors" mean number of genomes and
name of species that are compared, respectively. For example,
mp2-1A-110-7.anchors contains anchors between M. penetrans (#1 in the
table below) and M. synoviae (#A in the table).

** List of Genomes [#ve4f4af2]
** List of Genomes [#kb80e9be]

|~#|~Specie                                 |~Strain      |~Genbank  |h
|1|&specie(M. penetrans);                   | HF-2        | BA000026 |
|2|&specie(M. pulmonis);                    | UAB CTIP    | AL445566 |
|3|&specie(M. pneumoniae);                  | M129        | U00089   |
|4|&specie(M. mycoides subsp. mycoides);    | SC PG1      | BX293980 |
|5|&specie(M. mobile);                      | 163K        | AE017308 |
|6|&specie(M. genitalium);                  | G37         | L43967   |
|7|&specie(M. hyopneumoniae);               | 232         | AE017332 |
|8|&specie(M. gallisepticum);               | R           | AE015450 |
|9|&specie(M. capricolum subsp. capricolum);| ATCC 27343  | CP000123 |
|A|&specie(M. synoviae);                    | 53          | AE017245 |
|B|&specie(U. urealyticum);                 | ATCC 700970 | NC_002162|

- Genome archive download: &getfile(samples/mp_genomes.zip,1);
- Genome archive download: &getfile(../samples/mp_genomes.zip,1);
-- All sequence files are from [[NCBI Genbank>http://www.ncbi.nlm.nih.gov/Genbank/]], but are renamed.

** 2 Genomes All vs. All: Anchors [#vaaada59]
** 2 Genomes All vs. All: Anchors [#sd10f4fe]

Download zip files separately from the table below, or download all results: &getfile(samples/mp2-all-110-7.zip,sizeonly);
Download zip files separately from the table below, or download all results: &getfile(../samples/mp2-all-110-7.zip,sizeonly);

|1|&specie(M.penetrans);    |&getfile(samples/mp2-1-110-7.zip,sizeonly);|
|2|&specie(M.pulmonis);     |&getfile(samples/mp2-2-110-7.zip,sizeonly);|
|3|&specie(M.pneumoniae);   |&getfile(samples/mp2-3-110-7.zip,sizeonly);|
|4|&specie(M.mycoides);     |&getfile(samples/mp2-4-110-7.zip,sizeonly);|
|5|&specie(M.mobile);       |&getfile(samples/mp2-5-110-7.zip,sizeonly);|
|6|&specie(M.genitalium);   |&getfile(samples/mp2-6-110-7.zip,sizeonly);|
|7|&specie(M.hyopneumoniae);|&getfile(samples/mp2-7-110-7.zip,sizeonly);|
|8|&specie(M.gallisepticum);|&getfile(samples/mp2-8-110-7.zip,sizeonly);|
|9|&specie(M.capricolum);   |&getfile(samples/mp2-9-110-7.zip,sizeonly);|
|A|&specie(M.synoviae);     |&getfile(samples/mp2-A-110-7.zip,sizeonly);|
|1|&specie(M.penetrans);    |&getfile(../samples/mp2-1-110-7.zip,sizeonly);|
|2|&specie(M.pulmonis);     |&getfile(../samples/mp2-2-110-7.zip,sizeonly);|
|3|&specie(M.pneumoniae);   |&getfile(../samples/mp2-3-110-7.zip,sizeonly);|
|4|&specie(M.mycoides);     |&getfile(../samples/mp2-4-110-7.zip,sizeonly);|
|5|&specie(M.mobile);       |&getfile(../samples/mp2-5-110-7.zip,sizeonly);|
|6|&specie(M.genitalium);   |&getfile(../samples/mp2-6-110-7.zip,sizeonly);|
|7|&specie(M.hyopneumoniae);|&getfile(../samples/mp2-7-110-7.zip,sizeonly);|
|8|&specie(M.gallisepticum);|&getfile(../samples/mp2-8-110-7.zip,sizeonly);|
|9|&specie(M.capricolum);   |&getfile(../samples/mp2-9-110-7.zip,sizeonly);|
|A|&specie(M.synoviae);     |&getfile(../samples/mp2-A-110-7.zip,sizeonly);|

** 3 Genomes All vs. All: Anchors [#l35cefd9]
** 3 Genomes All vs. All: Anchors [#kdfa06b5]

Download zip files separately from the table below, or download all results: &getfile(samples/mp3-all-110-7.zip,sizeonly);
Download zip files separately from the table below, or download all results: &getfile(../samples/mp3-all-110-7.zip,sizeonly);

|1|&specie(M.penetrans);    |&getfile(samples/mp3-1-110-7.zip,sizeonly);|
|2|&specie(M.pulmonis);     |&getfile(samples/mp3-2-110-7.zip,sizeonly);|
|3|&specie(M.pneumoniae);   |&getfile(samples/mp3-3-110-7.zip,sizeonly);|
|4|&specie(M.mycoides);     |&getfile(samples/mp3-4-110-7.zip,sizeonly);|
|5|&specie(M.mobile);       |&getfile(samples/mp3-5-110-7.zip,sizeonly);|
|6|&specie(M.genitalium);   |&getfile(samples/mp3-6-110-7.zip,sizeonly);|
|7|&specie(M.hyopneumoniae);|&getfile(samples/mp3-7-110-7.zip,sizeonly);|
|8|&specie(M.gallisepticum);|&getfile(samples/mp3-8-110-7.zip,sizeonly);|
|9|&specie(M.capricolum);   |&getfile(samples/mp3-9-110-7.zip,sizeonly);|
|1|&specie(M.penetrans);    |&getfile(../samples/mp3-1-110-7.zip,sizeonly);|
|2|&specie(M.pulmonis);     |&getfile(../samples/mp3-2-110-7.zip,sizeonly);|
|3|&specie(M.pneumoniae);   |&getfile(../samples/mp3-3-110-7.zip,sizeonly);|
|4|&specie(M.mycoides);     |&getfile(../samples/mp3-4-110-7.zip,sizeonly);|
|5|&specie(M.mobile);       |&getfile(../samples/mp3-5-110-7.zip,sizeonly);|
|6|&specie(M.genitalium);   |&getfile(../samples/mp3-6-110-7.zip,sizeonly);|
|7|&specie(M.hyopneumoniae);|&getfile(../samples/mp3-7-110-7.zip,sizeonly);|
|8|&specie(M.gallisepticum);|&getfile(../samples/mp3-8-110-7.zip,sizeonly);|
|9|&specie(M.capricolum);   |&getfile(../samples/mp3-9-110-7.zip,sizeonly);|