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* 10 Mycoplasma + 1 Ureaplasma: All vs. All [#v263eb03]
Download and unpack the Genome archive and at least one a...
archive. Put both of seqs/ folder (genome sequences) and ...
folder (anchors) in same folder. Open any ".anchors" file...
see the anchors.
"X" and "YY" in filename "mpX-YY-*.anchors" mean number o...
name of species that are compared, respectively. For exam...
mp2-1A-110-7.anchors contains anchors between M. penetran...
table below) and M. synoviae (#A in the table).
** List of Genomes [#kb80e9be]
|~#|~Specie |~Strain ...
|1|&specie(M. penetrans); | HF-2 ...
|2|&specie(M. pulmonis); | UAB CTIP ...
|3|&specie(M. pneumoniae); | M129 ...
|4|&specie(M. mycoides subsp. mycoides); | SC PG1 ...
|5|&specie(M. mobile); | 163K ...
|6|&specie(M. genitalium); | G37 ...
|7|&specie(M. hyopneumoniae); | 232 ...
|8|&specie(M. gallisepticum); | R ...
|9|&specie(M. capricolum subsp. capricolum);| ATCC 27343 ...
|A|&specie(M. synoviae); | 53 ...
|B|&specie(U. urealyticum); | ATCC 700970...
- Genome archive download: &getfile(../samples/mp_genomes...
-- All sequence files are from [[NCBI Genbank>http://www....
** 2 Genomes All vs. All: Anchors [#sd10f4fe]
Download zip files separately from the table below, or do...
|1|&specie(M.penetrans); |&getfile(../samples/mp2-1-11...
|2|&specie(M.pulmonis); |&getfile(../samples/mp2-2-11...
|3|&specie(M.pneumoniae); |&getfile(../samples/mp2-3-11...
|4|&specie(M.mycoides); |&getfile(../samples/mp2-4-11...
|5|&specie(M.mobile); |&getfile(../samples/mp2-5-11...
|6|&specie(M.genitalium); |&getfile(../samples/mp2-6-11...
|7|&specie(M.hyopneumoniae);|&getfile(../samples/mp2-7-11...
|8|&specie(M.gallisepticum);|&getfile(../samples/mp2-8-11...
|9|&specie(M.capricolum); |&getfile(../samples/mp2-9-11...
|A|&specie(M.synoviae); |&getfile(../samples/mp2-A-11...
** 3 Genomes All vs. All: Anchors [#kdfa06b5]
Download zip files separately from the table below, or do...
|1|&specie(M.penetrans); |&getfile(../samples/mp3-1-11...
|2|&specie(M.pulmonis); |&getfile(../samples/mp3-2-11...
|3|&specie(M.pneumoniae); |&getfile(../samples/mp3-3-11...
|4|&specie(M.mycoides); |&getfile(../samples/mp3-4-11...
|5|&specie(M.mobile); |&getfile(../samples/mp3-5-11...
|6|&specie(M.genitalium); |&getfile(../samples/mp3-6-11...
|7|&specie(M.hyopneumoniae);|&getfile(../samples/mp3-7-11...
|8|&specie(M.gallisepticum);|&getfile(../samples/mp3-8-11...
|9|&specie(M.capricolum); |&getfile(../samples/mp3-9-11...
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* 10 Mycoplasma + 1 Ureaplasma: All vs. All [#v263eb03]
Download and unpack the Genome archive and at least one a...
archive. Put both of seqs/ folder (genome sequences) and ...
folder (anchors) in same folder. Open any ".anchors" file...
see the anchors.
"X" and "YY" in filename "mpX-YY-*.anchors" mean number o...
name of species that are compared, respectively. For exam...
mp2-1A-110-7.anchors contains anchors between M. penetran...
table below) and M. synoviae (#A in the table).
** List of Genomes [#kb80e9be]
|~#|~Specie |~Strain ...
|1|&specie(M. penetrans); | HF-2 ...
|2|&specie(M. pulmonis); | UAB CTIP ...
|3|&specie(M. pneumoniae); | M129 ...
|4|&specie(M. mycoides subsp. mycoides); | SC PG1 ...
|5|&specie(M. mobile); | 163K ...
|6|&specie(M. genitalium); | G37 ...
|7|&specie(M. hyopneumoniae); | 232 ...
|8|&specie(M. gallisepticum); | R ...
|9|&specie(M. capricolum subsp. capricolum);| ATCC 27343 ...
|A|&specie(M. synoviae); | 53 ...
|B|&specie(U. urealyticum); | ATCC 700970...
- Genome archive download: &getfile(../samples/mp_genomes...
-- All sequence files are from [[NCBI Genbank>http://www....
** 2 Genomes All vs. All: Anchors [#sd10f4fe]
Download zip files separately from the table below, or do...
|1|&specie(M.penetrans); |&getfile(../samples/mp2-1-11...
|2|&specie(M.pulmonis); |&getfile(../samples/mp2-2-11...
|3|&specie(M.pneumoniae); |&getfile(../samples/mp2-3-11...
|4|&specie(M.mycoides); |&getfile(../samples/mp2-4-11...
|5|&specie(M.mobile); |&getfile(../samples/mp2-5-11...
|6|&specie(M.genitalium); |&getfile(../samples/mp2-6-11...
|7|&specie(M.hyopneumoniae);|&getfile(../samples/mp2-7-11...
|8|&specie(M.gallisepticum);|&getfile(../samples/mp2-8-11...
|9|&specie(M.capricolum); |&getfile(../samples/mp2-9-11...
|A|&specie(M.synoviae); |&getfile(../samples/mp2-A-11...
** 3 Genomes All vs. All: Anchors [#kdfa06b5]
Download zip files separately from the table below, or do...
|1|&specie(M.penetrans); |&getfile(../samples/mp3-1-11...
|2|&specie(M.pulmonis); |&getfile(../samples/mp3-2-11...
|3|&specie(M.pneumoniae); |&getfile(../samples/mp3-3-11...
|4|&specie(M.mycoides); |&getfile(../samples/mp3-4-11...
|5|&specie(M.mobile); |&getfile(../samples/mp3-5-11...
|6|&specie(M.genitalium); |&getfile(../samples/mp3-6-11...
|7|&specie(M.hyopneumoniae);|&getfile(../samples/mp3-7-11...
|8|&specie(M.gallisepticum);|&getfile(../samples/mp3-8-11...
|9|&specie(M.capricolum); |&getfile(../samples/mp3-9-11...
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